This web page was produced as an assignment for Genetics 677, an undergraduate course at UW‐Madison.
Homologs of human BLM protein
Homologs of BLM protein can be found on Homologene. The following document is a compilation of protein sequences (in FASTA format) of 9 species with BLM protein. Please refer to BLM Gene Homologs for more information on the homologs of BLM protein and each protein's accession number.
homologs protein sequences.doc | |
File Size: | 40 kb |
File Type: | doc |
Alignments
Multiple protein sequence alignment using T-coffee
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Multiple sequence alignment using Clustal Program. The result is shown in FASTA format
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Analysis
Unlike BLM gene alignment results, homologous BLM protein alignment results suggested that protein sequences in the 9 homologs and human are relatively well-conserved, with more matches between human, chimpanzee, cattle, mouse, and chicken.
References
1) Homologene: http://www.ncbi.nlm.nih.gov/homologene
2) ClustalW:http://www.phylogeny.fr/version2_cgi/one_task.cgi?task_
3) T-COFFEE: http://www.phylogeny.fr/version2_cgi/one_task.cgi?task_type=tcoffee
2) ClustalW:http://www.phylogeny.fr/version2_cgi/one_task.cgi?task_
3) T-COFFEE: http://www.phylogeny.fr/version2_cgi/one_task.cgi?task_type=tcoffee